Decadent Double Chocolate Cheesecake Muffins

These incredibly rich double chocolate muffins feature a surprise layer of tangy, sweet cheesecake tucked inside, making them utterly decadent. I think they are the perfect treat because they combine two of my favorite things chocolate and cheesecake into one amazing bite. They feel special enough for a celebration but are simple enough to whip up whenever a craving strikes.

Delicious double chocolate cheesecake muffins with a creamy layer, served on a white plate.

Why These Muffins Are a Must Try

I’m always looking for ways to bring a little extra joy into everyday moments, and these muffins do just that. Think about a soft, moist chocolate muffin loaded with chocolate chips. Now imagine biting into that and discovering a smooth, creamy cheesecake filling. It’s a fantastic combination. They manage to be rich without feeling too heavy, striking a wonderful balance.

What I particularly love is their versatility. They make a breakfast feel indulgent, almost like you’re getting away with eating dessert first thing. But they are equally perfect as an afternoon snack with coffee or as a satisfying dessert after dinner. They look impressive too, with the lovely contrast between the dark chocolate muffin and the creamy filling peeking through.

Rows of chocolate muffins with visible cheesecake layers, arranged on a white tray.

The Magic Combination Chocolate and Cheesecake

There’s something undeniably special about pairing chocolate and cheesecake. The deep, slightly bitter notes of cocoa powder and the sweetness of chocolate chips perfectly complement the tangy creaminess of the cheesecake layer. It’s a classic duo for a reason.

In these muffins, the chocolate muffin base is wonderfully moist thanks to the sour cream and butter. It’s studded with mini chocolate chips, ensuring you get little bursts of chocolate in every mouthful. Then comes that delightful cheesecake layer. It’s simple, just cream cheese, sugar, and an egg, but it transforms the muffin into something extraordinary. It bakes up smooth and luscious, providing a lovely textural contrast to the cakey muffin.

Tips for Perfect Double Chocolate Cheesecake Muffins

Making these muffins is straightforward, but here are a few tips I’ve learned along the way to guarantee success every time.

  • Room Temperature Ingredients: Make sure your butter, egg (for the muffin batter), and cream cheese are truly at room temperature. This helps everything combine smoothly, especially the butter and sugar for the muffins and the cream cheese for the filling. Cold ingredients can result in a lumpy batter or filling.
  • Don’t Overmix: This is key for both the muffin batter and the cheesecake filling. For the muffins, mix the dry and wet ingredients only until just combined. Overmixing develops the gluten in the flour, which can make the muffins tough instead of tender. For the cheesecake layer, beat the cream cheese until smooth, then mix in the sugar. Add the egg last and mix just until it disappears. Overmixing the cheesecake filling incorporates too much air, which can cause it to puff up excessively during baking and then crack or sink as it cools.
  • Layering Technique: When assembling, put just enough muffin batter in the bottom to cover it. Then add a nice dollop of the cheesecake filling. Finally, carefully spoon the remaining muffin batter over the top, trying to seal the cheesecake layer inside. A little cheesecake peeking out is fine, even desirable.
  • Use Paper Liners: Liners make cleanup much easier and prevent the muffins from sticking to the pan. They also help keep the muffins moist.
  • Check for Doneness Carefully: Ovens vary, so start checking around the 16-minute mark. Insert a toothpick into the muffin part (not the cheesecake center). It should come out with a few moist crumbs attached. If it comes out wet, bake for another minute or two.
Chocolate muffin with cheesecake filling, presented on a white plate with a fork nearby.

How to Make Double Chocolate Cheesecake Muffins

Ready to bake these beauties? Here’s how I do it.

Get Ready
First things first, let’s get the oven warming up. Set it to 400 degrees F (about 200 C). While it heats, prepare your muffin pans. You’ll need about 20 standard-sized muffin cups, so line them with paper liners.

Mix the Dry Ingredients
In a medium-sized bowl, grab your all purpose flour, unsweetened cocoa powder, salt, baking powder, baking soda, and a touch of ground cinnamon. Whisk these together well. This step ensures the leavening agents and spices are evenly distributed, which means perfectly risen muffins. Set this bowl aside for a moment.

Prepare the Muffin Batter
Now, in a larger bowl, it’s time to cream the room temperature butter and light brown sugar together. Use an electric mixer if you have one, or some good old-fashioned elbow grease with a whisk. Keep mixing until the mixture looks lighter in color and feels fluffy. Add the large egg, vanilla extract, and sour cream. Beat everything together until it’s well combined and looks smooth.

Next, we combine the wet and dry ingredients. Add about a third of the dry flour mixture to the butter mixture and mix on low speed just until it starts to incorporate. Then, pour in about half of the milk and mix again. Repeat this process, alternating dry and wet ingredients and ending with the dry mixture. Remember not to overmix here, just combine. Finally, gently fold in most of the mini chocolate chips using a spatula, saving some for the topping. Put this delicious batter aside.

Close-up of chocolate muffins with cheesecake filling, placed on a white plate.

Make the Cheesecake Filling
In a separate bowl (yes, another bowl, but it’s worth it), beat the softened cream cheese until it’s nice and smooth. No lumps allowed here. Add the granulated sugar and mix again until smooth. Lastly, add the large egg and beat just until it’s combined. Seriously, stop mixing as soon as the egg is incorporated to keep the filling dense and creamy.

Assemble Your Muffins
Now for the fun part. Spoon a small amount of the chocolate muffin batter into the bottom of each paper liner. You just want enough to create a base layer. Next, add a spoonful of the cheesecake mixture right on top of the batter in the center. Then, carefully spoon the remaining chocolate muffin batter over the cheesecake layer, covering it as much as possible.

Top and Bake
Remember those mini chocolate chips you saved? Scatter them over the top of each muffin. Pop the muffin pans into your preheated oven. Bake for about 16 to 18 minutes. You’ll know they’re ready when a toothpick inserted into the chocolate muffin part comes out with just a few moist crumbs clinging to it.

Cooling Down
Once baked, take the muffins out of the oven. Let them cool in the muffin pans for about 5 minutes. This helps them set up a bit. After 5 minutes, carefully transfer them to a wire rack to cool completely. Waiting is hard, I know, because they smell amazing warm, but letting them cool allows the flavors to meld and the cheesecake texture to firm up perfectly.

Chocolaty muffins topped with mini chocolate chips, showcasing a creamy cheesecake layer inside.

Frequently Asked Questions

Can I use regular size chocolate chips?

Yes, you can definitely use regular chocolate chips if that’s what you have. Mini chocolate chips distribute more evenly throughout the muffin, but standard ones work just fine too.

How should I store these muffins?

Because of the cheesecake filling, these muffins should be stored in an airtight container in the refrigerator. They will keep well for up to 4 days.

Can I freeze these muffins?

Absolutely. Let the muffins cool completely first. Then, wrap each muffin individually in plastic wrap or aluminum foil. Place the wrapped muffins in a freezer-safe bag or container. They can be frozen for up to 3 months. To thaw, leave them in the refrigerator overnight or let them sit at room temperature for a few hours. You can gently warm them in the microwave if you like.

Can I make these gluten free?

I haven’t tested this recipe with gluten-free flour myself. However, you could likely substitute a good quality measure-for-measure gluten-free flour blend that contains xanthan gum. Keep in mind the texture might be slightly different.

What if I don’t have sour cream?

Plain full-fat yogurt or Greek yogurt makes a good substitute for sour cream in muffin recipes. It provides similar moisture and tang.

Print
clock clock iconcutlery cutlery iconflag flag iconfolder folder iconinstagram instagram iconpinterest pinterest iconfacebook facebook iconprint print iconsquares squares iconheart heart iconheart solid heart solid icon
Close-up of chocolate muffins with cheesecake filling, placed on a white plate.

Decadent Double Chocolate Cheesecake Muffins

5 Stars 4 Stars 3 Stars 2 Stars 1 Star No reviews
  • Author: Ryan Miller
  • Prep Time: 15 minutes
  • Cook Time: 20 minutes
  • Total Time: 35 minutes
  • Yield: 20 muffins
  • Category: Muffins
  • Method: Oven

Description

These Double Chocolate Cheesecake Muffins are wonderfully rich chocolate muffins with a luscious layer of creamy cheesecake filling! They offer a light yet decadent bite, perfect for a delightful breakfast treat or an irresistible dessert!


Ingredients

For the Muffins

  • ½ cup (115 grams) unsalted butter, at room temperature
  • ⅔ cup (130 grams) light brown sugar
  • 1 large egg
  • 2 tsp (10 ml) vanilla extract
  • ⅔ cup (160 grams) sour cream
  • 1 tsp (2 grams) ground cinnamon
  • 2 tsp (8 grams) baking powder
  • 1 tsp (4 grams) baking soda
  • 1 tsp (5 grams) salt
  • ½ cup (50 grams) unsweetened cocoa powder
  • 2 cups (240 grams) all-purpose flour
  • ⅔ cup (160 ml) milk
  • 1 cup (180 grams) mini chocolate chips

For the Cheesecake Layer

  • 1 package, 8 oz (230 grams) full-fat cream cheese, softened
  • ½ cup (105 grams) granulated sugar
  • 1 large egg

For the Topping

  • ¼ cup (50 grams) mini chocolate chips

Instructions

For the Muffins

  1. Warm your oven to 400 degrees F. Line 20 muffin pan cups with paper liners.
  2. In a medium bowl, whisk together the flour, cocoa powder, salt, baking powder, baking soda, and cinnamon. Keep this aside.
  3. Cream the brown sugar and butter together until the mixture looks light and fluffy. Add the egg, vanilla, and sour cream. Beat until everything is well combined and smooth.
  4. Gradually add the dry flour mixture and the milk to the butter mixture, alternating between adding a bit of dry and a bit of liquid ingredients.
  5. Gently fold in the mini chocolate chips. Put the batter aside for now.

For the Cheesecake Layer

  1. In a separate bowl, beat the softened cream cheese until it is smooth. Mix in the sugar until that is also smooth.
  2. Add the egg and beat just until it is mixed in. Be careful not to over-mix the filling.

To Assemble

  1. Spoon a small amount of the muffin batter into the bottom of each prepared muffin cup liner.
  2. Add a layer of the cheesecake mixture on top of the batter.
  3. Cover the cheesecake layer with the rest of the muffin batter.
  4. Scatter the remaining mini chocolate chips over the top of each muffin.
  5. Bake for 16 to 18 minutes. Check for doneness by inserting a toothpick into the center; it should come out with only a few moist crumbs attached.
  6. Take the muffins out of the oven and let them cool in the pan for about 5 minutes. Then, transfer them to a wire rack to finish cooling completely.

Notes

  • Store these muffins in an airtight container in the refrigerator for up to 4 days.
  •  You can freeze cooled muffins by wrapping them individually in plastic wrap, then placing them in a freezer bag for up to 3 months. Thaw overnight in the refrigerator or at room temperature.

Nutrition

  • Serving Size: 1 muffin
  • Calories: 232 kcal
  • Sugar: 17 g
  • Sodium: 295 mg
  • Fat: 12 g
  • Saturated Fat: 7 g
  • Unsaturated Fat: 4 g
  • Carbohydrates: 30 g
  • Fiber: 1 g
  • Protein: 4 g
  • Cholesterol: 40 mg

Leave a Comment

Your email address will not be published. Required fields are marked *

Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star

Scroll to Top